Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdzd4Q9QY39 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdzd4Q9QY39 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Il3ra-202ENSMUST00000223589 738 ntBASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdzd4Q9QY39 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Gm18032-201ENSMUST00000222541 538 ntBASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdzd4Q9QY39 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pdzd4Q9QY39 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pdzd4Q9QY39 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pdzd4Q9QY39 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Gm6659-201ENSMUST00000174752 547 ntBASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Gm7370-201ENSMUST00000219471 767 ntBASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pdzd4Q9QY39 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Gm16061-201ENSMUST00000122167 857 ntBASIC18.13■□□□□ 0.49
Pdzd4Q9QY39 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms