Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm4Q9QXA5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Lsm4Q9QXA5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm4Q9QXA5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm4Q9QXA5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Mir5133-201ENSMUST00000174955 77 ntBASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Gm2559-201ENSMUST00000201323 363 ntBASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm4Q9QXA5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Dio3-201ENSMUST00000097228 1449 ntBASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm4Q9QXA5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm4Q9QXA5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm4Q9QXA5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms