Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crlf1Q9JM58 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Crlf1Q9JM58 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Gm14057-201ENSMUST00000120631 482 ntBASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Gm26308-201ENSMUST00000157768 69 ntBASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Crlf1Q9JM58 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Phf7-203ENSMUST00000226565 1971 ntBASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Gm15920-201ENSMUST00000118998 402 ntBASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Crlf1Q9JM58 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Gm7230-201ENSMUST00000173026 815 ntBASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Gm29707-201ENSMUST00000196325 491 ntBASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.48□□□□□ -0.25
Crlf1Q9JM58 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.48□□□□□ -0.25
Crlf1Q9JM58 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Crlf1Q9JM58 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms