Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Gm12441-201ENSMUST00000121806 588 ntBASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Gm27275-201ENSMUST00000184318 272 ntBASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rbfox1Q9JJ43 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.35□□□□□ -0.11
Rbfox1Q9JJ43 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Gm43183-201ENSMUST00000200632 547 ntBASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rbfox1Q9JJ43 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rbfox1Q9JJ43 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rbfox1Q9JJ43 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms