Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ripk4Q9ERK0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ripk4Q9ERK0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ripk4Q9ERK0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ripk4Q9ERK0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Mir8112-201ENSMUST00000184382 131 ntBASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.51■□□□□ 0.87
Ripk4Q9ERK0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Gm11950-201ENSMUST00000121615 838 ntBASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Gm17807-201ENSMUST00000186869 298 ntBASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Gm10566-201ENSMUST00000086739 996 ntBASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ripk4Q9ERK0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ripk4Q9ERK0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Actl10-202ENSMUST00000226583 1501 ntBASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ripk4Q9ERK0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ripk4Q9ERK0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ripk4Q9ERK0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ripk4Q9ERK0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ripk4Q9ERK0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms