Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upf1Q9EPU0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upf1Q9EPU0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upf1Q9EPU0 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.17■□□□□ 0.66
Upf1Q9EPU0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upf1Q9EPU0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Gm44335-201ENSMUST00000196879 141 ntBASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Gm44297-201ENSMUST00000198304 141 ntBASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Gm44346-201ENSMUST00000198851 141 ntBASIC19.16■□□□□ 0.66
Upf1Q9EPU0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upf1Q9EPU0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Gm25948-201ENSMUST00000175334 112 ntBASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.15■□□□□ 0.66
Upf1Q9EPU0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
Upf1Q9EPU0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Upf1Q9EPU0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Gm44492-201ENSMUST00000197012 141 ntBASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upf1Q9EPU0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.13■□□□□ 0.65
Upf1Q9EPU0 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.13■□□□□ 0.65
Upf1Q9EPU0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.13■□□□□ 0.65
Upf1Q9EPU0 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.13■□□□□ 0.65
Upf1Q9EPU0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.13■□□□□ 0.65
Upf1Q9EPU0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Upf1Q9EPU0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.12■□□□□ 0.65
Upf1Q9EPU0 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.12■□□□□ 0.65
Upf1Q9EPU0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Upf1Q9EPU0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.11■□□□□ 0.65
Upf1Q9EPU0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.11■□□□□ 0.65
Upf1Q9EPU0 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms