Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdc40Q9DC48 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdc40Q9DC48 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cdc40Q9DC48 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Gm45058-201ENSMUST00000205810 766 ntBASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdc40Q9DC48 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Gm21362-201ENSMUST00000194272 928 ntBASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdc40Q9DC48 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Gm10013-201ENSMUST00000106074 672 ntBASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cdc40Q9DC48 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cdc40Q9DC48 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Gm24841-201ENSMUST00000158676 357 ntBASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Gm23634-201ENSMUST00000175071 91 ntBASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdc40Q9DC48 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdc40Q9DC48 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms