Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.57■□□□□ 0.56
Rpap3Q9D706 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpap3Q9D706 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.56■□□□□ 0.56
Rpap3Q9D706 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap3Q9D706 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Gm27741-201ENSMUST00000185060 237 ntBASIC18.55■□□□□ 0.56
Rpap3Q9D706 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Gm17971-201ENSMUST00000190239 806 ntBASIC18.55■□□□□ 0.56
Rpap3Q9D706 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap3Q9D706 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.54■□□□□ 0.56
Rpap3Q9D706 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap3Q9D706 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.53■□□□□ 0.56
Rpap3Q9D706 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap3Q9D706 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.52■□□□□ 0.56
Rpap3Q9D706 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap3Q9D706 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms