Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Gm5874-201ENSMUST00000096101 508 ntBASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nop56Q9D6Z1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nop56Q9D6Z1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nop56Q9D6Z1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop56Q9D6Z1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.39■□□□□ 0.38
Nop56Q9D6Z1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nop56Q9D6Z1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms