Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nip7Q9CXK8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nip7Q9CXK8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Rps4l-201ENSMUST00000071745 943 ntBASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nip7Q9CXK8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nip7Q9CXK8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Gm27867-201ENSMUST00000184778 125 ntBASIC20.92■□□□□ 0.94
Nip7Q9CXK8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Gm5867-201ENSMUST00000063197 592 ntBASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nip7Q9CXK8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.91■□□□□ 0.94
Nip7Q9CXK8 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
Nip7Q9CXK8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.9■□□□□ 0.94
Nip7Q9CXK8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nip7Q9CXK8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms