Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc3Q9CW03 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc3Q9CW03 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc3Q9CW03 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Gm5643-201ENSMUST00000117081 966 ntBASIC19.82■□□□□ 0.76
Smc3Q9CW03 Gm17661-201ENSMUST00000170317 270 ntBASIC19.82■□□□□ 0.76
Smc3Q9CW03 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Gm37025-201ENSMUST00000195159 829 ntBASIC19.82■□□□□ 0.76
Smc3Q9CW03 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc3Q9CW03 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smc3Q9CW03 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.82■□□□□ 0.76
Smc3Q9CW03 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.81■□□□□ 0.76
Smc3Q9CW03 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.81■□□□□ 0.76
Smc3Q9CW03 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc3Q9CW03 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.8■□□□□ 0.76
Smc3Q9CW03 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Gm15378-201ENSMUST00000121894 207 ntBASIC19.8■□□□□ 0.76
Smc3Q9CW03 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smc3Q9CW03 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.8■□□□□ 0.76
Smc3Q9CW03 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smc3Q9CW03 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc3Q9CW03 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms