Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl35Q9CQL6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl35Q9CQL6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl35Q9CQL6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Mrpl35Q9CQL6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms