Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb1Q9CQ70 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Gm38027-201ENSMUST00000192315 235 ntBASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
H2afb1Q9CQ70 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Gm12085-201ENSMUST00000119263 940 ntBASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Il3ra-202ENSMUST00000223589 738 ntBASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.78□□□□□ -0.2
H2afb1Q9CQ70 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
H2afb1Q9CQ70 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb1Q9CQ70 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb1Q9CQ70 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb1Q9CQ70 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
H2afb1Q9CQ70 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Gm7638-201ENSMUST00000121348 967 ntBASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb1Q9CQ70 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Gm10653-202ENSMUST00000139570 835 ntBASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb1Q9CQ70 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms