Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Gm2559-201ENSMUST00000201323 363 ntBASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim8Q99PJ2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Dio3-201ENSMUST00000097228 1449 ntBASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Gm11249-201ENSMUST00000117071 859 ntBASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Gm12896-201ENSMUST00000118430 226 ntBASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim8Q99PJ2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Gm12441-201ENSMUST00000121806 588 ntBASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Dancr-204ENSMUST00000132389 2347 ntBASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim8Q99PJ2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim8Q99PJ2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim8Q99PJ2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim8Q99PJ2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim8Q99PJ2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim8Q99PJ2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim8Q99PJ2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim8Q99PJ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms