Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm5682-201ENSMUST00000173402 505 ntBASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Mir3113-201ENSMUST00000175478 76 ntBASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdh15Q99PJ1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdh15Q99PJ1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcdh15Q99PJ1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh15Q99PJ1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh15Q99PJ1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh15Q99PJ1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh15Q99PJ1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdh15Q99PJ1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Gm26308-201ENSMUST00000157768 69 ntBASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh15Q99PJ1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdh15Q99PJ1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh15Q99PJ1 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh15Q99PJ1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms