Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cntnap4Q99P47 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Cntnap4Q99P47 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cntnap4Q99P47 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cntnap4Q99P47 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cntnap4Q99P47 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Gm13186-201ENSMUST00000118031 316 ntBASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Gm6623-201ENSMUST00000173570 544 ntBASIC18.02■□□□□ 0.48
Cntnap4Q99P47 AW822252-206ENSMUST00000208904 237 ntBASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cntnap4Q99P47 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cntnap4Q99P47 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cntnap4Q99P47 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Cntnap4Q99P47 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cntnap4Q99P47 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cntnap4Q99P47 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cntnap4Q99P47 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18■□□□□ 0.47
Cntnap4Q99P47 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 AC122351.1-201ENSMUST00000220467 126 ntBASIC18■□□□□ 0.47
Cntnap4Q99P47 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18■□□□□ 0.47
Cntnap4Q99P47 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cntnap4Q99P47 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cntnap4Q99P47 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cntnap4Q99P47 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms