Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hdac9Q99N13 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hdac9Q99N13 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.8■□□□□ 0.76
Hdac9Q99N13 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.8■□□□□ 0.76
Hdac9Q99N13 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.8■□□□□ 0.76
Hdac9Q99N13 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hdac9Q99N13 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hdac9Q99N13 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hdac9Q99N13 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.77■□□□□ 0.76
Hdac9Q99N13 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac9Q99N13 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hdac9Q99N13 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.76■□□□□ 0.75
Hdac9Q99N13 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Gm18206-201ENSMUST00000207027 926 ntBASIC19.76■□□□□ 0.75
Hdac9Q99N13 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.76■□□□□ 0.75
Hdac9Q99N13 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac9Q99N13 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms