Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Nck1Q99M51 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nck1Q99M51 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nck1Q99M51 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nck1Q99M51 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nck1Q99M51 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nck1Q99M51 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.11■□□□□ 0.17
Nck1Q99M51 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.11■□□□□ 0.17
Nck1Q99M51 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.11■□□□□ 0.17
Nck1Q99M51 Rab3c-203ENSMUST00000224180 967 ntBASIC16.11■□□□□ 0.17
Nck1Q99M51 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nck1Q99M51 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nck1Q99M51 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.1■□□□□ 0.17
Nck1Q99M51 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nck1Q99M51 Gm10849-201ENSMUST00000100397 618 ntBASIC16.1■□□□□ 0.17
Nck1Q99M51 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nck1Q99M51 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Mir6349-201ENSMUST00000184059 97 ntBASIC16.1■□□□□ 0.17
Nck1Q99M51 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nck1Q99M51 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.09■□□□□ 0.17
Nck1Q99M51 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nck1Q99M51 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.09■□□□□ 0.17
Nck1Q99M51 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.09■□□□□ 0.17
Nck1Q99M51 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Nck1Q99M51 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nck1Q99M51 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms