Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdk5rap3Q99LM2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap3Q99LM2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap3Q99LM2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap3Q99LM2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap3Q99LM2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap3Q99LM2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Cdk5rap3Q99LM2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Gm12527-201ENSMUST00000117967 564 ntBASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap3Q99LM2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Cdk5rap3Q99LM2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cdk5rap3Q99LM2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cdk5rap3Q99LM2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cdk5rap3Q99LM2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cdk5rap3Q99LM2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms