Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Gm18733-201ENSMUST00000173950 856 ntBASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcd2Q99JR8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcd2Q99JR8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcd2Q99JR8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd2Q99JR8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd2Q99JR8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 AW822252-206ENSMUST00000208904 237 ntBASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Rps4l-201ENSMUST00000071745 943 ntBASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd2Q99JR8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms