Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Gm13216-201ENSMUST00000117145 591 ntBASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Gm16061-201ENSMUST00000122167 857 ntBASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Gm13474-201ENSMUST00000122466 815 ntBASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdha3Q91Y16 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Haglr-201ENSMUST00000100000 2085 ntBASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdha3Q91Y16 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Gm45058-201ENSMUST00000205810 766 ntBASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha3Q91Y16 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha3Q91Y16 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Pcdha3Q91Y16 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha3Q91Y16 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha3Q91Y16 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Mir5130-201ENSMUST00000175160 84 ntBASIC17.58■□□□□ 0.4
Pcdha3Q91Y16 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms