Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha8Q91Y12 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Gm7638-201ENSMUST00000121348 967 ntBASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Gm21814-202ENSMUST00000203277 873 ntBASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Gm3375-201ENSMUST00000203929 796 ntBASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdha8Q91Y12 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdha8Q91Y12 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdha8Q91Y12 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Pcdha8Q91Y12 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdha8Q91Y12 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Il3ra-202ENSMUST00000223589 738 ntBASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdha8Q91Y12 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms