Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Mir8112-201ENSMUST00000184382 131 ntBASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga4Q91XY4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Gm9731-201ENSMUST00000209480 747 ntBASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga4Q91XY4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Gm7638-201ENSMUST00000121348 967 ntBASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga4Q91XY4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhga4Q91XY4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdhga4Q91XY4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhga4Q91XY4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhga4Q91XY4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhga4Q91XY4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdhga4Q91XY4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Gm18959-201ENSMUST00000208954 655 ntBASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhga4Q91XY4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms