Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cspg4Q8VHY0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm18421-201ENSMUST00000204122 625 ntBASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cspg4Q8VHY0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cspg4Q8VHY0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cspg4Q8VHY0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cspg4Q8VHY0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cspg4Q8VHY0 Gm6296-201ENSMUST00000222599 943 ntBASIC14.46□□□□□ -0.1
Cspg4Q8VHY0 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.46□□□□□ -0.1
Cspg4Q8VHY0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cspg4Q8VHY0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Gm23547-201ENSMUST00000158210 271 ntBASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Gm5745-201ENSMUST00000183748 313 ntBASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cspg4Q8VHY0 Gm12260-201ENSMUST00000122447 411 ntBASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cspg4Q8VHY0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms