Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpa1Q8VEE4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpa1Q8VEE4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpa1Q8VEE4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rpa1Q8VEE4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17■□□□□ 0.31
Rpa1Q8VEE4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17■□□□□ 0.31
Rpa1Q8VEE4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rpa1Q8VEE4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Gm42569-201ENSMUST00000200539 472 ntBASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rpa1Q8VEE4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Gm6365-201ENSMUST00000054711 744 ntBASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Flg-201ENSMUST00000050758 1488 ntBASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rpa1Q8VEE4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms