Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Dnajc28Q8VCE1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Gm17971-201ENSMUST00000190239 806 ntBASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dnajc28Q8VCE1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Dnajc28Q8VCE1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Dnajc28Q8VCE1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Gm28033-201ENSMUST00000184224 96 ntBASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dnajc28Q8VCE1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Gm11950-201ENSMUST00000121615 838 ntBASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms