Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Gm9731-201ENSMUST00000209480 747 ntBASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Vps39Q8R5L3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Gm13168-201ENSMUST00000121771 632 ntBASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps39Q8R5L3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Gm12085-201ENSMUST00000119263 940 ntBASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps39Q8R5L3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps39Q8R5L3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms