Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slf1Q8R3P9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slf1Q8R3P9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slf1Q8R3P9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms