Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Gm10138-203ENSMUST00000206952 366 ntBASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nudcd3Q8R1N4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nudcd3Q8R1N4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nudcd3Q8R1N4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Nudcd3Q8R1N4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nudcd3Q8R1N4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Gm13148-201ENSMUST00000118892 745 ntBASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nudcd3Q8R1N4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nudcd3Q8R1N4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nudcd3Q8R1N4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms