Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Zcchc9Q8R1J3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zcchc9Q8R1J3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Zcchc9Q8R1J3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zcchc9Q8R1J3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Zcchc9Q8R1J3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zcchc9Q8R1J3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Zcchc9Q8R1J3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Zcchc9Q8R1J3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Zcchc9Q8R1J3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Zcchc9Q8R1J3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Gm7153-201ENSMUST00000117092 455 ntBASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.78■□□□□ 0.28
Zcchc9Q8R1J3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Gm18958-201ENSMUST00000174258 762 ntBASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Mir3081-201ENSMUST00000175305 84 ntBASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.77■□□□□ 0.28
Zcchc9Q8R1J3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms