Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnt1Q8K1J6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trnt1Q8K1J6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Gm13216-201ENSMUST00000117145 591 ntBASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trnt1Q8K1J6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Gm37055-201ENSMUST00000191866 133 ntBASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trnt1Q8K1J6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trnt1Q8K1J6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Gm30025-201ENSMUST00000218555 728 ntBASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trnt1Q8K1J6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.27■□□□□ 0.2
Trnt1Q8K1J6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms