Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Hmgcs1Q8JZK9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hmgcs1Q8JZK9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.08■□□□□ 0.17
Hmgcs1Q8JZK9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hmgcs1Q8JZK9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hmgcs1Q8JZK9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hmgcs1Q8JZK9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hmgcs1Q8JZK9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hmgcs1Q8JZK9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hmgcs1Q8JZK9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hmgcs1Q8JZK9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms