Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Gm27000-201ENSMUST00000182943 842 ntBASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim61Q8JZK6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Olfr129-201ENSMUST00000122318 993 ntBASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim61Q8JZK6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim61Q8JZK6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim61Q8JZK6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Gm11336-201ENSMUST00000118168 334 ntBASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Gm18115-201ENSMUST00000221209 621 ntBASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim61Q8JZK6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trim61Q8JZK6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim61Q8JZK6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Gm24589-201ENSMUST00000116692 94 ntBASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Gm15794-201ENSMUST00000120182 631 ntBASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim61Q8JZK6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms