Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.58■□□□□ 0.24
Vps50Q8CI71 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps50Q8CI71 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps50Q8CI71 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Gm13836-201ENSMUST00000121159 501 ntBASIC16.57■□□□□ 0.24
Vps50Q8CI71 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Gm42545-201ENSMUST00000202755 922 ntBASIC16.57■□□□□ 0.24
Vps50Q8CI71 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps50Q8CI71 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Mir5122-201ENSMUST00000175004 89 ntBASIC16.56■□□□□ 0.24
Vps50Q8CI71 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.56■□□□□ 0.24
Vps50Q8CI71 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps50Q8CI71 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Gm10418-201ENSMUST00000100943 576 ntBASIC16.55■□□□□ 0.24
Vps50Q8CI71 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps50Q8CI71 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.55■□□□□ 0.24
Vps50Q8CI71 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Timm23-208ENSMUST00000226683 750 ntBASIC16.55■□□□□ 0.24
Vps50Q8CI71 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.55■□□□□ 0.24
Vps50Q8CI71 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps50Q8CI71 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms