Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Gm715-201ENSMUST00000117865 831 ntBASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vcpip1Q8CDG3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vcpip1Q8CDG3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vcpip1Q8CDG3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Dancr-204ENSMUST00000132389 2347 ntBASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vcpip1Q8CDG3 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Vcpip1Q8CDG3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms