Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SynpoQ8CC35 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SynpoQ8CC35 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SynpoQ8CC35 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SynpoQ8CC35 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Gm38027-201ENSMUST00000192315 235 ntBASIC16.32■□□□□ 0.2
SynpoQ8CC35 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SynpoQ8CC35 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.31■□□□□ 0.2
SynpoQ8CC35 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.31■□□□□ 0.2
SynpoQ8CC35 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.31■□□□□ 0.2
SynpoQ8CC35 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SynpoQ8CC35 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SynpoQ8CC35 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.29■□□□□ 0.2
SynpoQ8CC35 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.29■□□□□ 0.2
SynpoQ8CC35 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SynpoQ8CC35 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms