Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ptcd1Q8C2E4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd1Q8C2E4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd1Q8C2E4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd1Q8C2E4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ptcd1Q8C2E4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.7■□□□□ 0.9
Ptcd1Q8C2E4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.7■□□□□ 0.9
Ptcd1Q8C2E4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd1Q8C2E4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd1Q8C2E4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Gm11336-201ENSMUST00000118168 334 ntBASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Gm15372-201ENSMUST00000120729 834 ntBASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd1Q8C2E4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ptcd1Q8C2E4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Rps4l-201ENSMUST00000071745 943 ntBASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd1Q8C2E4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptcd1Q8C2E4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Ptcd1Q8C2E4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.64■□□□□ 0.9
Ptcd1Q8C2E4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptcd1Q8C2E4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms