Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp47Q8BY87 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Olfr129-201ENSMUST00000122318 993 ntBASIC23.78■■□□□ 1.4
Usp47Q8BY87 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC23.78■■□□□ 1.4
Usp47Q8BY87 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Otx2os1-206ENSMUST00000228153 787 ntBASIC23.77■■□□□ 1.4
Usp47Q8BY87 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
Usp47Q8BY87 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Usp47Q8BY87 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Gm16401-202ENSMUST00000197463 2074 ntBASIC23.75■■□□□ 1.39
Usp47Q8BY87 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Usp47Q8BY87 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Gm9103-201ENSMUST00000119371 405 ntBASIC23.74■■□□□ 1.39
Usp47Q8BY87 Gm17807-201ENSMUST00000186869 298 ntBASIC23.74■■□□□ 1.39
Usp47Q8BY87 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp47Q8BY87 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Ighv6-1-201ENSMUST00000193612 343 ntBASIC23.73■■□□□ 1.39
Usp47Q8BY87 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Gm42900-201ENSMUST00000197184 2167 ntBASIC23.73■■□□□ 1.39
Usp47Q8BY87 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp47Q8BY87 Gm15635-204ENSMUST00000208024 2539 ntBASIC23.73■■□□□ 1.39
Usp47Q8BY87 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms