Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trerf1Q8BXJ2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trerf1Q8BXJ2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trerf1Q8BXJ2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Trerf1Q8BXJ2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trerf1Q8BXJ2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trerf1Q8BXJ2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trerf1Q8BXJ2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trerf1Q8BXJ2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Mir8112-201ENSMUST00000184382 131 ntBASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.76■□□□□ 0.43
Trerf1Q8BXJ2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trerf1Q8BXJ2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trerf1Q8BXJ2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trerf1Q8BXJ2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms