Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Scfd1Q8BRF7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Scfd1Q8BRF7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scfd1Q8BRF7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Scfd1Q8BRF7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scfd1Q8BRF7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scfd1Q8BRF7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scfd1Q8BRF7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scfd1Q8BRF7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scfd1Q8BRF7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Gm7153-201ENSMUST00000117092 455 ntBASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scfd1Q8BRF7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scfd1Q8BRF7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms