Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Suds3Q8BR65 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Suds3Q8BR65 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Suds3Q8BR65 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Suds3Q8BR65 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.33■□□□□ 0.36
Suds3Q8BR65 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Suds3Q8BR65 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.32■□□□□ 0.36
Suds3Q8BR65 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.32■□□□□ 0.36
Suds3Q8BR65 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.32■□□□□ 0.36
Suds3Q8BR65 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Suds3Q8BR65 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.31■□□□□ 0.36
Suds3Q8BR65 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Gm10517-202ENSMUST00000192970 758 ntBASIC17.31■□□□□ 0.36
Suds3Q8BR65 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.31■□□□□ 0.36
Suds3Q8BR65 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.31■□□□□ 0.36
Suds3Q8BR65 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Suds3Q8BR65 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Gm12085-201ENSMUST00000119263 940 ntBASIC17.3■□□□□ 0.36
Suds3Q8BR65 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.3■□□□□ 0.36
Suds3Q8BR65 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms