Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Chmp2bQ8BJF9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Chmp2bQ8BJF9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.27■□□□□ 0.35
Chmp2bQ8BJF9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp2bQ8BJF9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chmp2bQ8BJF9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Chmp2bQ8BJF9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.26■□□□□ 0.35
Chmp2bQ8BJF9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Gm20049-201ENSMUST00000219950 730 ntBASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2bQ8BJF9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2bQ8BJF9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms