Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ubp1Q811S7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubp1Q811S7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Gm18959-201ENSMUST00000208954 655 ntBASIC16.61■□□□□ 0.25
Ubp1Q811S7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.61■□□□□ 0.25
Ubp1Q811S7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubp1Q811S7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Gm7370-201ENSMUST00000219471 767 ntBASIC16.6■□□□□ 0.25
Ubp1Q811S7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ubp1Q811S7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ubp1Q811S7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.59■□□□□ 0.25
Ubp1Q811S7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Gm27000-201ENSMUST00000182943 842 ntBASIC16.59■□□□□ 0.25
Ubp1Q811S7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubp1Q811S7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms