Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trim50Q810I2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim50Q810I2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim50Q810I2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim50Q810I2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim50Q810I2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim50Q810I2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim50Q810I2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim50Q810I2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim50Q810I2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim50Q810I2 Mir6982-201ENSMUST00000184354 68 ntBASIC16.44■□□□□ 0.22
Trim50Q810I2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim50Q810I2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim50Q810I2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim50Q810I2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Trim50Q810I2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim50Q810I2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim50Q810I2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.42■□□□□ 0.22
Trim50Q810I2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.42■□□□□ 0.22
Trim50Q810I2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim50Q810I2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim50Q810I2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim50Q810I2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim50Q810I2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.41■□□□□ 0.22
Trim50Q810I2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.41■□□□□ 0.22
Trim50Q810I2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.41■□□□□ 0.22
Trim50Q810I2 Gm13436-201ENSMUST00000120418 567 ntBASIC16.41■□□□□ 0.22
Trim50Q810I2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim50Q810I2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms