Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc116Q80X53 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.5■□□□□ 0.23
Ccdc116Q80X53 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc116Q80X53 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc116Q80X53 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc116Q80X53 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc116Q80X53 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.5■□□□□ 0.23
Ccdc116Q80X53 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Mir5122-201ENSMUST00000175004 89 ntBASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc116Q80X53 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc116Q80X53 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc116Q80X53 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc116Q80X53 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc116Q80X53 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc116Q80X53 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc116Q80X53 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms