Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.94■□□□□ 0.3
Usp8Q80U87 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.94■□□□□ 0.3
Usp8Q80U87 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Usp8Q80U87 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.93■□□□□ 0.3
Usp8Q80U87 Gm37292-201ENSMUST00000192062 758 ntBASIC16.93■□□□□ 0.3
Usp8Q80U87 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.93■□□□□ 0.3
Usp8Q80U87 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.93■□□□□ 0.3
Usp8Q80U87 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Usp8Q80U87 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp8Q80U87 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.92■□□□□ 0.3
Usp8Q80U87 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp8Q80U87 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp8Q80U87 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.92■□□□□ 0.3
Usp8Q80U87 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.92■□□□□ 0.3
Usp8Q80U87 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp8Q80U87 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp8Q80U87 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.92■□□□□ 0.3
Usp8Q80U87 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp8Q80U87 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Usp8Q80U87 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Usp8Q80U87 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp8Q80U87 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Usp8Q80U87 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.91■□□□□ 0.3
Usp8Q80U87 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.91■□□□□ 0.3
Usp8Q80U87 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp8Q80U87 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp8Q80U87 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp8Q80U87 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp8Q80U87 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp8Q80U87 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp8Q80U87 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp8Q80U87 Gm4974-201ENSMUST00000209974 875 ntBASIC16.9■□□□□ 0.3
Usp8Q80U87 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp8Q80U87 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp8Q80U87 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp8Q80U87 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp8Q80U87 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp8Q80U87 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp8Q80U87 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Usp8Q80U87 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Usp8Q80U87 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Usp8Q80U87 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
Usp8Q80U87 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp8Q80U87 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Usp8Q80U87 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp8Q80U87 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms