Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx58Q6Q899 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx58Q6Q899 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx58Q6Q899 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx58Q6Q899 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx58Q6Q899 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx58Q6Q899 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx58Q6Q899 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.85■□□□□ 0.93
Ddx58Q6Q899 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Gm27741-201ENSMUST00000185060 237 ntBASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Gm17971-201ENSMUST00000190239 806 ntBASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx58Q6Q899 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx58Q6Q899 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx58Q6Q899 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx58Q6Q899 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx58Q6Q899 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx58Q6Q899 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms