Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Gm42778-201ENSMUST00000199644 553 ntBASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf220Q6PDX6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf220Q6PDX6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf220Q6PDX6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf220Q6PDX6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf220Q6PDX6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf220Q6PDX6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf220Q6PDX6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf220Q6PDX6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Gm22325-201ENSMUST00000158904 308 ntBASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf220Q6PDX6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf220Q6PDX6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf220Q6PDX6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms