Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Gm33142-201ENSMUST00000193913 867 ntBASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rtl3Q6P1Y1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Gm22697-201ENSMUST00000175194 63 ntBASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Gm18101-201ENSMUST00000215769 548 ntBASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rtl3Q6P1Y1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rtl3Q6P1Y1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.39■□□□□ 0.38
Rtl3Q6P1Y1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Rtl3Q6P1Y1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rtl3Q6P1Y1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rtl3Q6P1Y1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Mir1668-201ENSMUST00000184114 107 ntBASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms