Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.98□□□□□ -0.17
Col7a1Q63870 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Gm25857-201ENSMUST00000082788 129 ntBASIC13.98□□□□□ -0.17
Col7a1Q63870 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col7a1Q63870 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col7a1Q63870 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col7a1Q63870 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.98□□□□□ -0.17
Col7a1Q63870 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col7a1Q63870 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.98□□□□□ -0.17
Col7a1Q63870 Gm13823-201ENSMUST00000119930 345 ntBASIC13.97□□□□□ -0.17
Col7a1Q63870 Gm17968-201ENSMUST00000194902 784 ntBASIC13.97□□□□□ -0.17
Col7a1Q63870 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.97□□□□□ -0.17
Col7a1Q63870 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.97□□□□□ -0.17
Col7a1Q63870 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.97□□□□□ -0.17
Col7a1Q63870 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.97□□□□□ -0.17
Col7a1Q63870 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.97□□□□□ -0.17
Col7a1Q63870 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.97□□□□□ -0.17
Col7a1Q63870 Gm4459-201ENSMUST00000118750 468 ntBASIC13.97□□□□□ -0.17
Col7a1Q63870 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col7a1Q63870 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col7a1Q63870 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col7a1Q63870 Gm38160-201ENSMUST00000193090 2499 ntBASIC13.96□□□□□ -0.17
Col7a1Q63870 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col7a1Q63870 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col7a1Q63870 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col7a1Q63870 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col7a1Q63870 Gm25745-201ENSMUST00000174945 133 ntBASIC13.96□□□□□ -0.17
Col7a1Q63870 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col7a1Q63870 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.96□□□□□ -0.17
Col7a1Q63870 Grk6-206ENSMUST00000224995 2971 ntBASIC13.96□□□□□ -0.17
Col7a1Q63870 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Col7a1Q63870 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col7a1Q63870 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col7a1Q63870 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.96□□□□□ -0.18
Col7a1Q63870 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.96□□□□□ -0.18
Col7a1Q63870 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Col7a1Q63870 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col7a1Q63870 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col7a1Q63870 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.96□□□□□ -0.18
Col7a1Q63870 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col7a1Q63870 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col7a1Q63870 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col7a1Q63870 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col7a1Q63870 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.95□□□□□ -0.18
Col7a1Q63870 Gm5682-201ENSMUST00000173402 505 ntBASIC13.95□□□□□ -0.18
Col7a1Q63870 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.95□□□□□ -0.18
Col7a1Q63870 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.95□□□□□ -0.18
Col7a1Q63870 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.95□□□□□ -0.18
Col7a1Q63870 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col7a1Q63870 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.94□□□□□ -0.18
Col7a1Q63870 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col7a1Q63870 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
Col7a1Q63870 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.94□□□□□ -0.18
Col7a1Q63870 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms